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ConversionLsmToMegaThread.h
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1 /*=========================================================================
2  Authors: The GoFigure Dev. Team.
3  at Megason Lab, Systems biology, Harvard Medical school, 2009-11
4 
5  Copyright (c) 2009-11, President and Fellows of Harvard College.
6  All rights reserved.
7 
8  Redistribution and use in source and binary forms, with or without
9  modification, are permitted provided that the following conditions are met:
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11  Redistributions of source code must retain the above copyright notice,
12  this list of conditions and the following disclaimer.
13  Redistributions in binary form must reproduce the above copyright notice,
14  this list of conditions and the following disclaimer in the documentation
15  and/or other materials provided with the distribution.
16  Neither the name of the President and Fellows of Harvard College
17  nor the names of its contributors may be used to endorse or promote
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21  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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32 
33 =========================================================================*/
34 
35 #ifndef __ConversionLsmToMegaThread_h
36 #define __ConversionLsmToMegaThread_h
37 
38 #include <qstring.h>
39 #include <qthread.h>
40 #include <vector>
41 
42 #include "fstream"
44 #include "QGoGUILibConfigure.h"
45 
46 class vtkLSMReader;
47 
48 class QGOGUILIB_EXPORT ConversionLsmToMegaThread:public QThread
49 {
50  Q_OBJECT
51 public:
56 
60  virtual ~ConversionLsmToMegaThread();
61 
66  void SetBaseName(std::string iBaseName);
67 
72  void SetLsmPath(std::string iLsmPath);
73 
78  void SetMegaPath(std::string iMegaPath);
79 
84  void SetOutputFileType(const GoFigure::FileType & iFileType);
85 
90  void ExportWithReimplemented(std::string iMegaPath);
91 
95  int GetNumberOfPoints();
96 
97 public slots :
98 signals:
99  void ConversionTerminatedSent();
100 
101  void InitialisationProgressSent();
102 
103  void ProgressSent();
104 
105 protected:
109  void run();
110 
111 private:
114 
115  std::string m_BaseName;
116  std::string m_LsmPath;
117  std::string m_MegaPath;
119  std::vector< vtkLSMReader * > m_LSMReaders;
120  unsigned int m_Plaque;
121  unsigned int m_Row;
122  unsigned int m_Column;
123  unsigned int m_XTile;
124  unsigned int m_YTile;
125  unsigned int m_ZTile;
126  double m_XOverlap;
127  double m_YOverlap;
128  double m_ZOverlap;
129  unsigned int m_NumberOfChannels;
130  unsigned int m_NumberOfTimePoints;
131  unsigned int m_Dim;
132 };
133 
134 #endif
std::vector< vtkLSMReader * > m_LSMReaders
virtual void run()